Recent Publications from PubMed

• Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site.
  Strauch EM, Bernard SM, La D, Bohn AJ, Lee PS, Anderson CE, Nieusma T, Holstein CA, Garcia NK, Hooper KA, Ravichandran R, Nelson JW, Sheffler W, Bloom JD, Lee KK, Ward AB, Yager P, Fuller DH, Wilson IA, Baker D
  Nature biotechnology. 2017 Jun; :
• Comprehensive Mapping of HIV-1 Escape from a Broadly Neutralizing Antibody.
  Dingens AS, Haddox HK, Overbaugh J, Bloom JD
  Cell host & microbe. 2017 Jun; 21 6: 777-787.e4
• Deep mutational scanning identifies sites in influenza nucleoprotein that affect viral inhibition by MxA.
  Ashenberg O, Padmakumar J, Doud MB, Bloom JD
  PLoS pathogens. 2017 Mar; 13 3: e1006288
• Complete mapping of viral escape from neutralizing antibodies.
  Doud MB, Hensley SE, Bloom JD
  PLoS pathogens. 2017 Mar; 13 3: e1006271
• Identification of positive selection in genes is greatly improved by using experimentally informed site-specific models.
  Bloom JD
  Biology direct. 2017 Jan; 12 1: 1