Recent Publications from PubMed

• An Antigenic Atlas of HIV-1 Escape from Broadly Neutralizing Antibodies Distinguishes Functional and Structural Epitopes.
  Dingens AS, Arenz D, Weight H, Overbaugh J, Bloom JD
  Immunity. 2019 Jan; :
• Comprehensive profiling of translation initiation in influenza virus infected cells.
  Machkovech HM, Bloom JD, Subramaniam AR
  PLoS pathogens. 2019 Jan; 15 1: e1007518
• Modeling site-specific amino-acid preferences deepens phylogenetic estimates of viral sequence divergence.
  Hilton SK, Bloom JD
  Virus evolution. 2018 Jul; 4 2: vey033
• Destabilized adaptive influenza variants critical for innate immune system escape are potentiated by host chaperones.
  Phillips AM, Ponomarenko AI, Chen K, Ashenberg O, Miao J, McHugh SM, Butty VL, Whittaker CA, Moore CL, Bloom JD, Lin YS, Shoulders MD
  PLoS biology. 2018 Sep; 16 9: e3000008
• Estimating the frequency of multiplets in single-cell RNA sequencing from cell-mixing experiments.
  Bloom JD
  PeerJ. 2018 ; 6 : e5578